Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMREPDFLNHFLKKGYFKKHAKAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEAELPIYISNFSGEFSEARARNFRYDFFQEVMKKTGATALVTAHHADDQVETIFMRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSNQENHYFRNRIRNSYLPELEKENPRFRDAILGIGNEILDYDLAIAELSNNINVEDLQQLFSYSESTQRVLLQTYLNRFPDLNLTKAQFAEVQQILKFKSQYRHPIKNGYELIKEYQQFQICKISPQADEKEDELVLHYQNQVAYQGYLFSFGLPLEGELIQQIPVSRETSIHIRHRKTGDVLIKNGHRKKLRRLFIDLKIPMEKRNSALIIEQFGEIVSILGIATNNLSKKTKNDIMNTVLYIEKIDR
1VBK Chain:B ((178-298))-----------------TEGRMIGILHD-ELSALAIFLMMK----RGVEVIPVYIGKD-----DKNLEKVRSLWNLLK-RYSY-GSK----GFLVVAESFDRVLKLIRDFGVKGVIKGLRP------VSEIT---------EDFKMF----PVPVYYPLIALPEEYI------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 472 -92270 -195.49 -802.34
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -195.49
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_1VBK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VBK-query.scw
PDB file : Tito_Scwrl_1VBK.pdb: