Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPRPITAVIHRQALQNNLAVVRKAMP-NSKVFAVVKANAYGHGIERVYEAF-K-AADGFALLDLEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQHP---YPAQFDVFLKMNSGMSRLGFKP-QHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAFEEIVKDLP---GERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSLRSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRTVGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTARVQFINQV
3E5P Chain:C ((6-369))-HRPTRLHIDTQAITENVQKECQRLPEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREAGVQDPILIL-SVVDLAYVPLLIQYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTGMGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEID--TSYFEKQAGRFKAVLAVLEELPRYVHVSNSATALWHPD-VPGNMIRYGVAMYGLNPSGNK-LAPSYALKPALRLTSELIHVKRLAAGEGIGYGETYVTEAEEWIGTVPIGYADGWLRHLQGF-TVLVNGKRCEIVGRVCMDQCMIRLAE--EVPVGPVVTLVGKDGN-EENTLQMVAEKLETIHYEVACTFSQRIPRE---


General information:
TITO was launched using:
RESULT:

Template: 3E5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1985 -38283 -19.29 -108.14
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -19.29
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_3E5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E5P-query.scw
PDB file : Tito_Scwrl_3E5P.pdb: