Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFISFEGTEGVGKTTLIRKIHQHFEEQGKQVVLTREPGGTPLAEQIRSMLLAVNHDENMSHDTELLLIYAARAQHLQQVILPALESNKIVLSDRFTDASFAYQCSGRGLSQDKLQLLNQNFVSR--MPEVTFWLDAPIELGMNRARERGALDRFEQEKLSFFTKVREGYETLWKAEPERIKRLDATQSPDQVFEQALQYLA
5XAI Chain:B ((1-190))MLIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILLT----EELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNE-FATRGVKPDITLLLDIPVDIALRRLKEK---NRFENKE--FLEKVRKGFLELAK-EEENVVVIDASGEEEEVFKEILRALS


General information:
TITO was launched using:
RESULT:

Template: 5XAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 929 -13870 -14.93 -73.77
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -14.93
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_5XAI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XAI-query.scw
PDB file : Tito_Scwrl_5XAI.pdb: