Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYKQTVQLEIISVNQTKTKIELVISQIEQQIKNRSLTPGTRLPSVRKLAKDLGFSVSTIVEAYERLIALGKIESRSGSGFYVVAPLAPLALNELGPKLDRSIDPLWISRQSLEAEPNAFKPGCGWLPNDWMPLESIRKALRSATRSEDDSLLGYSSPLGLSALRDLLARRAQSKGIEANLNQVLLTDSGTQAIDLVCRFLLKPDDVVLIDDPCYFNFHALLKVHQVKVVGIPYTPNGPDLEAFKEAIEGYNPRLYITNSGIHNPTGATLSLSTAHQLLKLIDQSNLIVIEDDIFSDFEYTP--APRLAALD---NLSRVIFIGSFSKTLSASIRCGYIIAKPEWIDQIADLKIATSFSHNGLSAKILHTALTDGSYRKHLDLLKVRLAQAMQETIAKLKSI---RIEPWIEPKAGIFVWCRLPEGVDAEKIAQFCLNRQVILAPGNAFSQAQSAGQFIRFNITQSNHDYIY---KTLAEALLQESLEKQV
2ZYJ Chain:A ((30-393))-----------------------------------------------------------------------------------------------------------------QRPGILSFAGGLPAPELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIG-----VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLNQMLVHELLKEGF-SERLERVRRVYREKAQAMLHALDREVPKEV-RYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRLGRALKGL------


General information:
TITO was launched using:
RESULT:

Template: 2ZYJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1968 -81736 -41.53 -231.55
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -41.53
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_2ZYJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZYJ-query.scw
PDB file : Tito_Scwrl_2ZYJ.pdb: