Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAIANNHVVSFHYKLTNAEGETLDQSQGEPLAYLHGAGNIIPGLENALTGKTVGDKFTVNVPAAEGYGEYNPDLVQEVPAQMFQGVDNIQPGMQFQAQTDDG-VQIVTVKAVEGDNVIVDANFPLAGQDLTFEVEIVEIREASQEELDHGHVHGAGGHHH
4ODM Chain:C ((2-147))--KVGQDKVVTIRYTLQV-EGEVLDQ---GELSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVTVDFNHPLAGKDLDFQVEVVKVREATPEELLHGH---------


General information:
TITO was launched using:
RESULT:

Template: 4ODM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 588 -23592 -40.12 -162.70
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.80

3D Compatibility (PKB) : -40.12
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_4ODM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ODM-query.scw
PDB file : Tito_Scwrl_4ODM.pdb: