Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAWTPHVTVATVVEKDGRYLFVE--EHSEGFVHTVFNQPAGHVECGETLTEAAIRETLEETGHHIDIDALLGIYTYTPPMFPDRTYYRFCFLAHVTHVESDPKLDTGIVSAVWMTLDELKESARARSPLVIKAIEDAMKGQHYPLALIYEHPFSPSLTSHLDA
5IW5 Chain:B ((129-232))----APCIIVA--IRRDDSILLAQHTRHRNG-VHTVL---AGFVEVGETLEQAVAREVMEESG--IKVKNLRYV-TSQPWPFPQSLMTAFMAEYDSGDIVIDPK---ELLEANWYRYDDL--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5IW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 448 -44891 -100.20 -440.10
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -100.20
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.296

(partial model without unconserved sides chains):
PDB file : Tito_5IW5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IW5-query.scw
PDB file : Tito_Scwrl_5IW5.pdb: