Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEIKRIQQQPDLAQDIYAVMAAVYPVSPWTLEQIQADLSQDQTWYALAYDGAEVIGFLTVQETL-FEAEVLQIAVKGAYQGQGIASALFA-Q--LPTDKEIFLEVRQSNQRAQAFYKKEKMAVIAERKAYYHDPVEDAIIMKREIDEG
3BLN Chain:A ((2-142))MKNVTKA--SIDDLDSIVHIDIDVIG-NDSRRNYIKHSIDE--GRCVIVKEDNSISGFLTYDTNFFDCTFLSLIIVSPTKRRRGYASSLLSYMLSHSPTQKIFSSTNESNESMQKVFNANGFIRSGIVENLDEGD-PEIIFYTKKLR--


General information:
TITO was launched using:
RESULT:

Template: 3BLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 617 -26441 -42.85 -193.00
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -42.85
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.386

(partial model without unconserved sides chains):
PDB file : Tito_3BLN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BLN-query.scw
PDB file : Tito_Scwrl_3BLN.pdb: