Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSKANHAKTVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDVLISIDTWKSQVAEAALAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERALARAAEAGIAPENILLDPGIGFGLTKKENLLLLRDLDKLHQKGYPIFLGVSRKRFVINILEENGFEVNPETELGFRNRDTASAHVTSIAARQGVEVVRVHDVASHRMAVEIASAIRLADEAENLDLKQYK
2DZB Chain:B ((28-286))--------RVRLLGVLNLTPD----------PERALERAREMVAEGADILDLGAEST-------PVEEEKRRLLPVLEAVLSLG-VPVSVDTRKPEVAEEALKLGAHLLNDVTGLR-DERMVALAARHGVAAVVMHMP------------A-HARYRDVVAE--------------VKAFLEAQARRALSAGV--PQVVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKR---TIGELSGVE-DPAQ----RVHGSVAAHL--FAVMKGVRLLRVHDVRAHREALGVWEALY--------------


General information:
TITO was launched using:
RESULT:

Template: 2DZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1271 -147617 -116.14 -630.84
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -116.14
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_2DZB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DZB-query.scw
PDB file : Tito_Scwrl_2DZB.pdb: