Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFSPLCWIVPSIYVIMKEGFKIGKGVFMLKLGVIGTGAISH-HFIEAAHTSGEYQLVAIYSRKLETAATFASRYQNIQLFDQLEVFFKS-SFDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQTAEKNNCFIFEAARNYHEKAFTTIKNFLAD---KQVLGADFNYAKYSSKMPDLLAGQTPNVFSDRFAGGALMDLGIYPLYAAVRLFGK-ANDATYHAQQLDNSIDLNGDGILFYPD-YQVHIKAGKNIT-SNLPCEIYTTDGTL-TLNTIEHIRSAIFTDHQ------GNQ-VQLP-----IQQAPHTMTEEVAAFAHMIQQPDLNLYQTWLYDAGSVHELLYTMRQTAGIRFEAEK
3M2T Chain:B ((2-336))-------------------------SLSLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISDIPVLDNVPAMLNQVPLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAARRSDVVSGVGMNFKFARPVRQLREMTQVDEFGETLHIQLNHYANKP-------RAPLWGLDST-LRSFLLAQAIHTIDLAITFGDGELRRVQSSVQR--HDDALIVRADMAFSSGATASLLAGTSFPYFEFDMKLVSSSSTLVELDNLWNI-TLHEPEHATRPTGAKRWRGAWQPGPLDSGYERSGYHGELHQFFQAIREHR--RFEADFASLLPTYRVIEEICSADAVAQGL--


General information:
TITO was launched using:
RESULT:

Template: 3M2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1645 -26263 -15.97 -83.91
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -15.97
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_3M2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3M2T-query.scw
PDB file : Tito_Scwrl_3M2T.pdb: