Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKIEDVVKLGPVIPVLAFDSAEQGEHVSRALHAGGVKVLEITLRTAAGLAAIERASQLADDIVVGVGTITKPEHCAQAKKAGAKFGVSPGLTKDLHLAAQDAGLPLLPGVMTPSDLIQAIELGYDIVKFFPAQQAGGVEMLKAFYGPFPNLRFCPTGGITAETAPDFLKQPNVVCVGGSWLTPKPVVAAQDWAEITRLAQIASQL
2YW3 Chain:E ((4-198))-MDPLAVLAESRLLPLLTVRGGEDLLGLARVLEEEGVGALEITLRTEKGLEALKALRK--SGLLLGAGTVRSPKEAEAALEAGAAFLVSPGLLEEVAALAQARGVPYLPGVLTPTEVERALALGLSALKFFPAEPFQGVRVLRAYAEVFPEVRFLPTGGIKEEHLPHYAALPNLLAVGGSWLLQGN------LEAVRAKVRAAK--


General information:
TITO was launched using:
RESULT:

Template: 2YW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1061 -147995 -139.49 -758.95
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain E : 0.79

3D Compatibility (PKB) : -139.49
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_2YW3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YW3-query.scw
PDB file : Tito_Scwrl_2YW3.pdb: