Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIKSERISLKHLLTVEALTDQEVMGLIRRGQEFKQGANWTPQ--KRQYFATNLFFENSTRTHKSFDVAEKKLGLEVIEFE--ASTSSVQKGETLYDTVLTMSALGVDVAVIRHGDENYYDELIQSKTIQCSIINGGDGSGQHPTQCLLDLMTIYEEFGHFEGLKVAIVGDITHSRVAKSNMQMLKRL-GAQVFFSGPR---------EWYDDEFEVYGHYMPLDELLDQVDVMMMLRVQHERHDGKESFSKEGYHQEHGLTVERAKKLQKHAIIMHPAPVNRDVELADSLVEGLQSRIVQQMSNGVFVRMAILEAVLNGKA
4KGV Chain:A ((7-305))----------KHIISINDLSRDDLNLVLATAAKLK--ANPQPELLKHKVIAS-CFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAA-RLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMK---VLHPLP--RVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLN---


General information:
TITO was launched using:
RESULT:

Template: 4KGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1501 40615 27.06 142.51
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 27.06
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.414

(partial model without unconserved sides chains):
PDB file : Tito_4KGV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KGV-query.scw
PDB file : Tito_Scwrl_4KGV.pdb: