Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSQLNVDLQEIAKFEALAAKWWDQHSEFRPLHQINPLRLNWIDERAGGLAGKKVLDVGCGGGILAESMARRGA-DVLGIDMGEAPLAVGRLHAQQENV-QNIEYRQIPVEELAQEQAGQYDVVTCMEMMEHVPDPASIVKACQTLVKPGGHVFFSTINRNPKSYLFAIIGAEYVLRMLPKGTHDYHKFIRPSEMAHDIRNAGLTLKEMTGLHYNPITKRYWLAPNVDVNYMVHTIKTGV
4QNU Chain:H ((121-275))------------------------------------------------LTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLP--ALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVNEGELVLETLVIDGDENTVLVPGDRY-----A-QMRNVYFIPSALALKNWLKKCGFVDIRIADV----------------------------


General information:
TITO was launched using:
RESULT:

Template: 4QNU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 709 -19326 -27.26 -126.31
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain H : 0.63

3D Compatibility (PKB) : -27.26
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_4QNU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4QNU-query.scw
PDB file : Tito_Scwrl_4QNU.pdb: