Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKKFLFQIHWFLGISAGLILSIMGVTGAIYSYDQQILKWVNTDSYVVQAQSSPKLTPAQLYQHFTTIQPEIKINSITIAKDATASSVVNIEKEGERRGYNMMVNPYTAQVLPEVQGRKLLLLIQQIHRNLTAGEFGKQITGACALMLIYFVLSGLYLRWPKKHSARQWLAVKPKLKGRNFIWDLHAVVGTWVIVFYLLFACTGLYWSYDWWRSGMFKVLGVEQPKMQGHGGSGRNKDQLPKIQLDNAQLITALNQTWSGFNNQIGRDYSTLTVNLPKKDDGKIELSFVDATPQHERARNQAVYNYKTANIEKMELYEDKKLNQKIMSSMLPVHRGSFFGPVYQFVAMLASLAMPLFFVTGWMLYLKRRKQKKLTQAARQSLAGHYIDQNAKPWLITYATQTGVAEQLAWRTATSLQEAHQPVQVKSVQQLTEADLQQHEQILFVISTYGTGEAPDLASNFAKKLLKTNLRLQHVKYAVLALGSKEYPDTYCSFGHTVDDWLKNNGAKALFDIIEVDNANPADIQNWNQALVKATKLDLHAVNIEKVFDNWTLQQRDLLNPNSLGQPAYNIELTANH-EAIWQAGDIAEIQPGNSPERINKFLQHHHILKNAVVDSLQV--------SIE------------------------------------KALWN------------------------KDLTG-EIEPFANLDHLLEQLPTLPTREYSIASIPSQ--QVLRLVVRQQYDESDDLDLDLGLGLGLGLGLGLGSGWLTQHTEINQ-----NVALRIRTNESFHLIDD-NRPIICIGNGTGIAGLMSLLHTRTRH-----NYTENWLIFGERQRAHDFFYASTIEAWQTMGMLKRLDLAFSRDQEQRVYVQDIIQQNAAELINWIERGAVLYVCGSI-DGMASGVDQALIHILGEE----------QVDELRQQGRYRRDVY
3QFS Chain:A ((60-457))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNNLDEESNKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELLPRLQARYYSIASSSKVHPNSVHICAVVVEYETK----------AGRINKGVATNWLRAKEPVGENGGRALVPMFV-RKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARD-VQNTFYDIVAELGAMEHAQAVDYIKKLMTKGRYSLDVW


General information:
TITO was launched using:
RESULT:

Template: 3QFS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1475 13280 9.00 43.68
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 9.00
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_3QFS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QFS-query.scw
PDB file : Tito_Scwrl_3QFS.pdb: