Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLGDFTMTDIVTRTELEEAKVDCKDLGDALNTKKVINPRYGEAFYSLPLAVQKVMETGGFEPFLTQAQLLSSTPTISPKAAKALDTGKIWYWGKGEGETEDSWHDTGLSELDQAISFTAEKMSFEYAEKLFKWEDLNKIPVMYLDALARLWLANLPKDVATHIGEFIDMQKSVYTQNGKNLNALYDSTGLPVAWITSDGKTVLPKIGVLTDYIENKVASVNRQYVDSVNQSAFLTDSLAVQTMGEFQQQQTVITAADVNAAAVFPHNVTKLRIPAITRIQKNKYLCFFEARLND-DDFGENSQGVCTLTVNESTFEITTSDIKALHAREVRPSGGFYTFMNACATKLD-SGRVICLYVKRYG--------------TSEHYIYKRYSDDDGLTWSDYENIGTQLNMTFYNLLCP-CSQGLVKRYGSNNGRIIFPVWYSGKAYVASDFRAGYIYSDDGGTAWHDGAFAEIPYGNEVQCAEDLNGDLIFAIRLDQTVGGGTNDPTIQVKKLVKLLNGTLSTFIDIPAPRLTNARVMSGLIQSKNA--Y-DRSTPKLQFICAN-DLNRKNLKVWNSYDSGLNWTQ-YDVPNTEVFAAYSCIEKLSYEKNLLLWEADNYSSLKTSIVSLRNLIGVA
4J9T Chain:A ((17-356))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFPNYSHPALTVTPDGDLLASYDGRPTGIAAPGP---NSILQRRSTDGG-RTWGEQQVVSAGQTT--APIKGFSHPSYLVDRETGTIFNFHVYSQRQGWEGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRSRFAASGEGIQLRYGPHAGRLIQQYAIINA---AGAIQAVSVYSDDHGRTWRAGEAVGV-GMSHNKTVELSDGRVLLNSADSARSG---------YRKVAVSTDGGHSYGPVTIDRDLPDPTNDASIIRAFPDAPAGSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQ--PGSMSYSTLTALPDGTYGLLYEPG--TGIRYANFNLAWLG---


General information:
TITO was launched using:
RESULT:

Template: 4J9T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2038 5994 2.94 18.85
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 2.94
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.382

(partial model without unconserved sides chains):
PDB file : Tito_4J9T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4J9T-query.scw
PDB file : Tito_Scwrl_4J9T.pdb: