Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------------------------DCTI-----------ERRLGTQT---KARARTSAKAMPEMIPAEPGKYTVIAGTRVWVYGDCRTYP-THLPDGSTISGRPFQASDVEEDC-----------------------------------------------------
1KK6 Chain:A ((1-207))MGPNPMKMYPIEGNKSVQFIKPILEKLENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQLPIKGDTII-GNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLAGGNPANEIKQRFDQDTINQLLDIKWWNWPIDIINENIDKILDNSIIREVIW


General information:
TITO was launched using:
RESULT:

Template: 1KK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 264 19593 74.22 264.77
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : 74.22
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.261

(partial model without unconserved sides chains):
PDB file : Tito_1KK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KK6-query.scw
PDB file : Tito_Scwrl_1KK6.pdb: