Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLLVGLGNPGDKYFETKHNVGFMLIDQLAKKQNVTFTHDKIFQADLASFFLNGEKIYLVKPTTFMNESGKAVHALLTYYGLDIDDLLIIYDDLDMEVGKIRLRAKGSAGGHNGIKSIIQHIGTQVFNRVKIGIGRPKNGMSVVHHVLSKFDRDDYIGILQSIDKVDDSVNYYLQEKKFEKTMQRYNG
4LWR Chain:A ((6-192))NISLIVGLGNPGSEYAQTRHNAGFWFVEQLADKYGITLKNDPKFHGISGRGNIEGHDVRLLLPMTYMNRSGQSVVPFSKFYQIAPEAILIAHDELDMNPGVIRLKTGGGHGGHNGLRDIVPHIG-PNFHRLRIGIGHPGSKERVSGHVLGKAPSNEQSLMDGAIDHALSKVKL-LVQGQVPQAMNQINA


General information:
TITO was launched using:
RESULT:

Template: 4LWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1026 -110559 -107.76 -591.22
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -107.76
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_4LWR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LWR-query.scw
PDB file : Tito_Scwrl_4LWR.pdb: