Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
4S35 Chain:B ((2-181))-----LIAFEGIDGSGKTTQAKKLYEYLKQKGYFVSLYREPGGTKVGEVLREILL---TEELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRL-----KEKNR--FENKEFLEKVRKGFLELAKEEEN-VVVIDASGEEEEV----------------


General information:
TITO was launched using:
RESULT:

Template: 4S35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 867 -66318 -76.49 -368.43
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -76.49
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.594

(partial model without unconserved sides chains):
PDB file : Tito_4S35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4S35-query.scw
PDB file : Tito_Scwrl_4S35.pdb: