Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLDGYTRLAAVVANPIKHSISPFIHNRAFEATATN----GAYVAWEIEASDLVETVANIRRYQMFGINLSMPYKEQVIPYLDKLSDEARLIGAVNTVVNENGNLIGYNTDGKGFFKCLPSFTISGKKMTLLGAGGAAKSILAQAILDGVSQISVFVRSVSMEKTRPYLDKLQEQTGFKVDLCALEYVSELQARIAESDLLVNATSVGMDGQSSPVPENIV---LPETLLVADIIYQPFETPFLKWARSQGNPAVNGLGMLLYQAAEAFQLWTGKEMPTEEIWQSLTEKYQ
3PHH Chain:A ((1-257))MKLKSF----GVFGNPIKHSKSPLIHNACFLTFQKELRFLGHYHPILLPLESHIKS--EFLHLGLSGANVTLPFKERAFQVCDKIKGIALECGAVNTLVLENDELVGYNTDALGFYLSLK---Y--QNALILGAGGSAKALACELKKQGL-QVSVLNRS-----SRG-LDFFQR---LGCD-CFME------PPKSAFDLIINATSASLHNEL-PLNKEVLKGYFKEGKLAYDLAYG-FLTPFLSLAKELKTPFQDGKDMLIYQAALSFEKFSASQIPYSKAFE-------


General information:
TITO was launched using:
RESULT:

Template: 3PHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1468 -9945 -6.77 -40.26
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -6.77
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.516

(partial model without unconserved sides chains):
PDB file : Tito_3PHH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PHH-query.scw
PDB file : Tito_Scwrl_3PHH.pdb: