Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKLVFVCLGNICRSPMAEFVMKSMTDN-------YEIQSRATSSWEHGNPIHKGTQGIFQQYEIPYDKNKTSLQISKEDFEAFDYIIGMDASNISDLRQMCPVDCQDKIYSFS---------SESVPDPWYTG--DFEETYRRVQEGCQAWLERLEKES
1D1Q Chain:B ((7-160))KISVAFIALGNFCRSPMAEAIFKHEVEKANLENRFNKIDSFGTSNYHVGESPDHRTVSICKQHGVKIN--HKGKQIKTKHFDEYDYIIGMDESNINNLKKIQPEGSKAKVCLFGDWNTNDGTVQTIIEDPWYGDIQDFEYNFKQITYFSKQFLKKE----


General information:
TITO was launched using:
RESULT:

Template: 1D1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 643 -4490 -6.98 -33.01
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -6.98
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_1D1Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D1Q-query.scw
PDB file : Tito_Scwrl_1D1Q.pdb: