Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITKTLPLTDIHRHLDGNIRIQTILELGQQYNLDLPAYDIESLRPHVQVMDNQPDLLSFLSKLDWGVKVL-ASLDACKRIAFENMQDAAQQGLDYVELRFSPGYMGM------------AHQLPLEGVVEAVIAGVKEGSQAYGVKANLIGIMSRTFGQEACEKELNALLAH-KNDIKALDLAGDELGFP---GNLFIDHFKKARDAGWHITVHAGEAAGPESIWQAIEELGAERIGHGVKAVQDLKLLDYLAKHQIGIESCLTSNIQTNTVPSLAEHPLKTFLEHGVLATINTDDPAVEGIEIQHEYLTAAPLAGLSPEQIYTAQENGLKIAFLSEQEKDELRQKYQ
1ADD Chain:A ((1-344))TPAFNKPKVELHVHLDGAIKPETILYFGKKRGIALPADTVEELRNIIG-MDKPLSLPGFLAKFDYYMPVIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVDPMPWNQTEG-DVTPDDVVDLVNQGLQEGEQAFGIKVRSILCCMRHQPS-WSLEVLELCKKYNQKTVVAMDLAGDETIEGSSLFPGHVEAYEGAVKNGIHRTVHAGEVGSPEVVREAVDILKTERVGHGYHTIEDEALYNRLLKENMHFEVCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFKSTLDTDYQMTKKDMGFTEEEFKRLNINAAKSSFLPEEEKKELLERL-


General information:
TITO was launched using:
RESULT:

Template: 1ADD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1955 15846 8.11 48.46
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 8.11
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.438

(partial model without unconserved sides chains):
PDB file : Tito_1ADD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ADD-query.scw
PDB file : Tito_Scwrl_1ADD.pdb: