Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRRKQGMPTINQLVRKPRKSKVEKSNSPALNKGYNSFKKTQTNVNSPQKRGVATRVGTMTPKKPNSALRKYARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIVRGALDTAGVNDRKQSRSKYGTKKPKA
4JI3 Chain:L ((5-122))--------PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLWGVRYHIVRGVYDAAGVKDRKKSRSKYGT-----


General information:
TITO was launched using:
RESULT:

Template: 4JI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 494 -28750 -58.20 -243.64
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain L : 0.88

3D Compatibility (PKB) : -58.20
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_4JI3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JI3-query.scw
PDB file : Tito_Scwrl_4JI3.pdb: