Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFQIQYKSSTRDGGNNVNGLFITIEGPDGAGKTSILNELYPLLKEVAKTEIIQTREPGGIPIAEEIRAVILDPKNDRMDERTEALLYAAARRQHLVEKVLPALAKGKIVLCDRFVDSSLAYQGAGRRIGVTEIARLNEFATEGTTPDFTLYLDVDSDTGLRRIK-KNRQNQIDRLDSEGLEFHQRVRHAYLKLAEENPERIHKVDARKSFEEVLQTSYHTIIEQYPQFFEN
5H56 Chain:A ((1-183))--------------------MLIAFEGIDGSGKTTQAKKLYEYLKQKGYF-VSLYREPGGTKVGEVLREILL---TEELDERTELLLFEASRSKLIEEKIIPDLKRDKVVILDRFVLSTIAYQGYGKGLDVEFIKNLNEFATRGVKPDITLLLDIPVDIALRRLKEKNR--------FENKEFLEKVRKGFLELAKEE-ENVVVIDASGEEEEVFK----------------


General information:
TITO was launched using:
RESULT:

Template: 5H56.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 884 -39675 -44.88 -217.99
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -44.88
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_5H56.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H56-query.scw
PDB file : Tito_Scwrl_5H56.pdb: