Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKSKPIIIGVTGGSGSGKTSVSRAIFNNFPD-------HSIMMLEQDSYYKDQSHLSF--EERLNTNYDHPFAFDNDLLIQHVGDLLNYKAIEKPVYDYVAHTRSQATIIQEPKEVIILEGILILEDERLRDLMDIKVYVDTDDDIRIIRRIKRDMEERGRTLDSVIEQYLTVVKPMYHQFIEPTKRYADIIVPEGGENHVAIDLITTKVASFLNHK
2JEO Chain:A ((21-233))---MRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDV-R---DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILNG-


General information:
TITO was launched using:
RESULT:

Template: 2JEO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 930 28351 30.48 141.05
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 30.48
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.417

(partial model without unconserved sides chains):
PDB file : Tito_2JEO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JEO-query.scw
PDB file : Tito_Scwrl_2JEO.pdb: