Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYIADSARYEKMEYRKSGHSGLKLPILSLGLWQNFGDYDPIHNQREILRGAFDMGITHFDLANNYGGPAGAAEKNFGRIFREDFQAYRDELIISSKAGYHMWEGPYGEWGSRKSIISSCDQSLQRMGLDYVDIFYHHRPDPDTPLEETAEALMQLVRQGKALYIGISNYNGEDTKKMTEILKRKE-APFIIHQMRYNMFSRALLEDDLSPVLEEEGLGAITFSPLAQGLLTNRYLHGIPEDSRAHRKEIPFLSEEQ----VGSTLEKIKALQTIAVSRGQSLAQMALAWNLRQKSVTSVLVGASRLSQLQESVRMMD-NLDFSPEEELRIDQILE----
1QRQ Chain:A ((1-325))----------LQFYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAA--GKAEVVLGNIIKKK-GWRRSSLVITTKIFWGG-KAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQVLPKLSSSIVHEIDSILGNKPY


General information:
TITO was launched using:
RESULT:

Template: 1QRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1814 -84368 -46.51 -267.83
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -46.51
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_1QRQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QRQ-query.scw
PDB file : Tito_Scwrl_1QRQ.pdb: