Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNKSRLGRGRHGKTRHVLLALIGILAISICLLGGFIAFKIYQQKSFEQKIESLKKEKDDQLSEGNQKEHFRQGQAEVIAYYPLQGEKVISSVRELINQDVKDKLESKDNLVFYYTEQEESGLKGVVNRNVTKQIYDLVAFKIEETEKTSLGKVHLTEDGQPFTLDQLFSDASKAKEQLIKELTSFIEDKKIEQDQSEQIVKNFSDQDLSAWNFDYKDSQIILYPSPVVENLEEIALPVSAFFDVIQSSYLLEKDAALYQSYFDKKHQKVVALTFDDGPNPATTPQVLETLAKYDIKATFFVLGKNVSGNEDLVKRIKSEGHVVGNHSWSHPILSQL-SLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRN-------------SLDLSFIMWDVDSLDWKSK--NEASILTEIQHQV--ANGSIVLMHDIHSPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE
5JMU Chain:A ((16-220))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPGNKIIYLTFDDGPGKY-TQGLLDVLDKYNVKATFFVTNTHPD-YQNMIAEEAKRGHTVAIHSASHKYNQIYTSEQAFFDDLEQMNSIIKAQTGNDASIIRFPGGSSNTVSKDYPGIMTQLVNDVTARGLLYCDWNVSSGDANPKPISTEQVVQNVISGVQSHNVSVVLQHDIKEFSVNAVEQIIQWGQANGYTFLPLTTSSPMS------------


General information:
TITO was launched using:
RESULT:

Template: 5JMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 933 -15070 -16.15 -81.02
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -16.15
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.528

(partial model without unconserved sides chains):
PDB file : Tito_5JMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JMU-query.scw
PDB file : Tito_Scwrl_5JMU.pdb: