Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEANMKHLKTFYKKWFQLLVVIVISFFSGALGSFSITQLTQKSSVNNSNNNSTITQTAYKNENSTTQAVNKVKDAVVSVITYSANRQNSVFGNDDTDTDSQRISSEGSGVIYKKNDKEAYIVTNNHVINGAS---KVDIRLSDGTKVPGEIVGADTFSDIAVVKISSE-KVTTVAEFGDSSKLTVGETAIAIGSPLGSEYANTVTQGIVSSLNRNVSLKSEDGQAISTKAIQTDTAINPGNSGGPLINIQGQVIGITSSKIATNGGTSVEGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYR-NGKEETTSIKLNKSSGDLES
2Z9I Chain:A ((6-314))--------------------------------------------------------------GSVEQVAAKVVPSVVMLETDL---------------------EEGSGIILSA---EGLILTNNHVIAAAAKPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGL-TPISLGSSSDLRVGQPVLAIGSPLGL--EGTVTTGIVSALNRPVST------NTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATL--QSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDK----------------TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKA------


General information:
TITO was launched using:
RESULT:

Template: 2Z9I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1728 37195 21.52 133.79
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : 21.52
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_2Z9I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2Z9I-query.scw
PDB file : Tito_Scwrl_2Z9I.pdb: