Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRSEKSKDTKARLAPKQKISYEKKPDPAITAYAVQSLNWLRQAEFLMSAPKLALCVEDSGYEIAFAGRSNAGKSSAINALTNQKQLARASKKPGRTQMINFFSL-GNPDQRLVDLPGYGYAAVPEDMKRVWQKELENYLIHRKSLQGLVLLMDIRHPLQHFDMMMLEWAYSRHLFVHILLTKADKLNRGPANKVLLEVKQQLKKMKLDFSIQLFSSLNKLGLEELASVMAGRLHFTLEQQPEFDVDAIPEASDEDAEE
3B1V Chain:A ((3-163))------------------------------------------------------------MTEIALIGNPNSGKTSLFNLITG-HNQ-RVGNWPGVTVERKSGLVKKNKDLEIQDLPGIYSMSPYS----PEAKVARDYLL-SQRADSILNVVDATNLE--RNLYLTTQLIETGIPVTIALNMIDVLDGQGKKINVDKLSY-----HLGVPVVATSALKQTGVDQVVKKAAHTTT------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 878 -24342 -27.72 -152.14
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -27.72
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3B1V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B1V-query.scw
PDB file : Tito_Scwrl_3B1V.pdb: