Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYTTLKEVTKTAEELNFTVGAFNTHNLEMLPAMLGAAKEMGSPIIIQTSVDTAKYIGMHVLVNVMTAIAEEEMVDAVLHLDHARDFDDIKEAIDSGYTSVMYDGSHLPFKENILKTKAVVEYAHAHGVSVEGELGTIGGTEEGIHVAENDKVYTRPEDAVKFVEATGVDALAIAIGTNHGQFKS--KTEVNIPLLKEIDAVVDVPLVIHGGTGVK---------------------EEDYPELINNGIRKFNVGTELLVNWTKVAKETFSETEINKSLRHNVIPANEAVKEIVKHKIGLFMNLESPINLGNK
1RVG Chain:A ((1-305))MLVTGLEILKKAREEGYGVGAFNVNNMEFLQAVLEAAEEQRSPVILALSEGAMKYGG-RALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVMIDKSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEE------KDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASGGEIGEAAGIHPEDIKKAISLGIAKINTDTDLRLAFTALIREALNKNPKEFDPRKYLGPAREAVKEVVKSRMELFGSVGRA------


General information:
TITO was launched using:
RESULT:

Template: 1RVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1539 -60260 -39.15 -218.33
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -39.15
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.563

(partial model without unconserved sides chains):
PDB file : Tito_1RVG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RVG-query.scw
PDB file : Tito_Scwrl_1RVG.pdb: