Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTDGLGGIFGIKHSEAVDAPRVLVASHMDEVGFMVSEIKPDGTFRVVEIGGWNPMVVSSQRFKLLTRDGHEIPVISGSVPPHLTRGKGGPTMPAIADIVFDGGFADKAEAESFGIRPGDTIVPDSSAILTANEKNIISKAWDNRYGVLMVSELAEALSGQKLGNELYLGSNVQEEVGLRGAHTSTTKFDPEVFLAVDCSPAGDVYGGQGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQYYCGKGGTDAGAAHLKNGGVPSTTIGVCARYIHSHQTLYAMDDFLEAQAFLQALVKKLDRSTVDLIKHY
2CF4 Chain:A ((3-331))--SMIEKLKKFTQIPGISGYEERIREEIIREIKDFA-DYKVDAIGNLIVELGE---GEERILFMAHMDEIGLLITGITDEGKLRFRKVGGIDDRLLYGRHVNVVTEKG-ILDGVIGATPPHLSLER-DKSVIPWYDLVIDIGAESKEEALEL-VKPLDFAVFKKHFSVLN-GKYVSTRGLDDRFGVVALIEAIKDLVDHELEGKVIFAFTVQEEVGLKGAKFLANHYYPQYAFAIDSFACCSPLTGDVKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIEIQIGVTGGGTDASAFQ--D-RSKTLALSVPIKYLHSEVETLHLNDLEKLVKLIEALAFE------------


General information:
TITO was launched using:
RESULT:

Template: 2CF4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1970 -192506 -97.72 -585.12
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -97.72
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_2CF4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CF4-query.scw
PDB file : Tito_Scwrl_2CF4.pdb: