Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMKIAVLVSGNGSNLQALIDANLSGQ----IVGVLSNKADAYALERAQNANIATAVISHKDFPSREDFD-EAMHQQLIAWQADVVILAGFMRILTANFVDKWQGKMLNIHPSLLPAYKGVNTHQRVLNTGDRLHGCTVHFVTSELDAGQAIAQSAIEVKEHDNVASLAERVHKLEHFIYPQVAEWLCNGQLTWKNGQAYFRNQILEHPIRFASW
3KCQ Chain:D ((9-182))-LRVGVLISGRGSNLEALAKAFS---SSVVISCVISNNAEARGLLIAQSYGIPTFVVK------RKPLDIEHISTVLREHDVDLVCLAGFMSILPEKFVTDWHHKIINIHPSLLPSFKGLNAQEQAYKAGVKIAGCTLHYVYQELDAGPIIMQAAVPVLREDTAESLASRILAAEHVCYPK---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KCQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 806 -30264 -37.55 -182.31
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.76

3D Compatibility (PKB) : -37.55
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.514

(partial model without unconserved sides chains):
PDB file : Tito_3KCQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KCQ-query.scw
PDB file : Tito_Scwrl_3KCQ.pdb: