Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLIQPELFFSALSPAEQRIQQALEDIRQGKPVLVMDDFDRENEADLIVAAETLTVETMVRMIHDGSGIVCLCLTEELADHLELPPMVSQNSSQFHTAFTVTIEAAQ-GVTTGVSAKDRVTTIKTAIKDGAVASDLNRPGHVFPLRARNGGVLTRRGHTEGTIDLARLAGLKPAGVLCELTNPDG-----------TMASGIQVLAYAQTHHLTVITIEELVQYRQQHGI
1K4O Chain:A ((12-224))-----------------FDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTHNADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGKRPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTE-


General information:
TITO was launched using:
RESULT:

Template: 1K4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1030 -85016 -82.54 -422.96
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -82.54
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_1K4O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K4O-query.scw
PDB file : Tito_Scwrl_1K4O.pdb: