Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRRFKKSRSQKVKRSVNIVLLTIYLLLVCFLLFLIFKYNILAFRYLNLVVTALVLLVALVGLLLIIYKKAEKFTIFLLVFSILVSSVSLFAVQQFVGLTNRLNATSNYSEYSLSVAVLADSEIENVTQLTSVTAPTGTDNENIQKLLADIKSSQNTDLTVNQSSSYLAAYKSLIAGETKAIVLNSVFENIIELEYPDYASKIKKIYTKGFTKKVEAPKTSKNQSFNIYVSGIDTYGPISSVSRSDVNILMTVNRDTKKILLTTTPRDAYVPIADGGNNQKDKLTHAGIY-GVDSSIHTFSESRWTF-PIYIISNICLLYNT
4DE9 Chain:A ((22-148))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFDPGKDSFSVLLLGID-------QARSDANVLVTFNRKEKTAKMLSIPRDAYVNIPGH---GYDKFTHAHAYGGVDLTVKTVEEMLDIPVDYVVESNFTAFEDV


General information:
TITO was launched using:
RESULT:

Template: 4DE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 394 -18204 -46.20 -195.74
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -46.20
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4DE9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DE9-query.scw
PDB file : Tito_Scwrl_4DE9.pdb: