Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLKDYIATIENYPKEGITFRDISPLMADGNAYSYAVREIVQYATDKKVDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELNGREKIGDYDYK--VLMHY
4M0K Chain:D ((30-198))-TLKQAIRTVPDFPEPGIQFKDITPVLGHPELLRLAIEALLEPFQEQEITKVVGIESRGFILGGMLAHHLDAGFVPVRKKGKLPYQTLAESYQLEYGTDTIEMHIDAIEPGDRVLIHDDVIATGGTAEATIRLVERAGGEVVGCAFLIELTGLQGRKRLP-AHVPVHTVLQ-


General information:
TITO was launched using:
RESULT:

Template: 4M0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 849 -135260 -159.32 -809.94
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain D : 0.85

3D Compatibility (PKB) : -159.32
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_4M0K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M0K-query.scw
PDB file : Tito_Scwrl_4M0K.pdb: