Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALLRIEKNNGIATVYLNRPDKRNAMSFALLKELVTTAKAIQKDRDIRCVILTGEAQVFSAGIDLSDLNNPKNSAFAIWELVKPGQSLFQKAFLIWQNLPVPVIAALEGYCFGAGMQLALAADIRIAHPDTKMSIMESRWGLVPDMGLTRSLKGLIGVDLAKELTLTARVLDGNYAKDIGLVTHLSENPLEKANAIASEMLQRSPDALTAAKRVLDAMEHQPEKSLRLEKIWQLKLLLGKNSKLARKKDKHPEVKFLPRQYR
3PE8 Chain:A ((10-203))--VLLVDTTDRVRTLTLNRPQSRNALSAELRSTFFRALSDAQNDDDVDVVIVTGADPVFCAGLDLKEL--------------SPK----------WPDMTKPVIGAINGAAVTGGLELALYCDILIASENAKFADTHARVGLMPTWGLSVRLPQKVGVGLARRMSLTGDYLSAQDALRAGLVTEV----------VAHD------DLLTAARRVAASIVGNNQKAVR-----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1032 -133297 -129.16 -720.52
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -129.16
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_3PE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PE8-query.scw
PDB file : Tito_Scwrl_3PE8.pdb: