Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSLSQVNADVLKQAQQRIQQDLLTTLAAF---SIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAG----DILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQ------ILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKL-RQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGENAKELVEISQFLLARTN
4GP2 Chain:A ((4-244))---------DVVSRLHQKYGAEVEKALVRYLSIGLAEDFREAVLYQVKTGGKRLRPLLTLAAAEAVSG-QWRPALPAAAIVELIHNYSLIYDDI--IDRGDVRRGLPTVRKAFGDNAAILVGIWYREAIEEAVLDTPKPTLF-----AKEVAEVIKAIDEGERLDILFEAAGR---SDPYFVQARWREVTLDDYIKMVSLKTGALIAAAAKWGVLSV--SDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYGDPKKFGKEIGKD------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GP2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1014 -47622 -46.96 -209.79
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -46.96
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.421

(partial model without unconserved sides chains):
PDB file : Tito_4GP2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GP2-query.scw
PDB file : Tito_Scwrl_4GP2.pdb: