Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKFNEIFLDLEQKILAKEYPPHSLLPSENQLIKIYGVSRETIRKALNLLTTEGYIQKKQGKGSIVLDRNRFDFPISGLTSYKELQETQRIPSETIIHTLEETEVTKALNEITGWEIGAPVWHLIRERKINGEVVILDTDYLLKEIVPILTPA-QAQGSIYEYFENELSLTIAYAQKEITVEEVTEIMKTAMDLHDDTYAVVVRSLVHLEDTRCFEYSESVHRLDKFRFVEFARRRKV
4ZSK Chain:A ((9-168))---------------------------------------------------------------------------ALQLTSYTEDMRAQGLEPTSQLLDIGYITADDRLAGLLDITAGGRVLRIERLRMANGEPMAIETTHLSAKRFPALRRSLVKYTSLYTALAEVYDVHLAEAEETIETSLATPREAGLLGTDVGLPMLMLSRHSQDRTGQPVEWVRSVYRGDRYKFVARLKR---


General information:
TITO was launched using:
RESULT:

Template: 4ZSK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 738 -23471 -31.80 -147.62
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -31.80
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_4ZSK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZSK-query.scw
PDB file : Tito_Scwrl_4ZSK.pdb: