Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLENDIKKVLVSHDEITEAAKKLGAQLTKDYAGK------NP-ILVGILKGSIPFMAELVKHI---DTHIEMDFMMVSSYHGGTASSGVINIKQDVTQDIKGRHVLFVEDIIDTGQTLKNLRDMFKEREAASVKIATLLDKPEGRVVEIEADYTCFTIPNEFVVGYGLDYKENYRNLPYIGVLKEEVYSN
1P17 Chain:D ((9-191))------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSY---------VRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-


General information:
TITO was launched using:
RESULT:

Template: 1P17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 797 -9043 -11.35 -55.14
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -11.35
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_1P17.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1P17-query.scw
PDB file : Tito_Scwrl_1P17.pdb: