Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLKDYIATIENYPKEGITFRDISPLMADGNAYSYAVREIVQYATDKKVDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELNGREKIGDYDYK--VLMHY
4LZA Chain:B ((27-195))-EIKMMIREIPDFPKKGIKFKDITPVLKDAKAFNYSIEMLAKALEGRKFDLIAAPEARGFLFGAPLAYRLGVGFVPVRKPGKLPAETLSYEYELEYGTDSLEIHKDAVLEGQRVVIVDDLLATGGTIYASAKLVESLGGIVDSIIFLTELTFLDGRKKLD--GYDIISLIKF


General information:
TITO was launched using:
RESULT:

Template: 4LZA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 823 -131493 -159.77 -787.38
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -159.77
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_4LZA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LZA-query.scw
PDB file : Tito_Scwrl_4LZA.pdb: