Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNRPIGFLDSGVGGLTVVRELMRQLPHEEIVYIGDSARAPYGPRPAEQIREYTWQLVNFLLTKDVKMIVIACNTATAVVWEEIKAQ-LDIPVLGVILPGASAAIKSSQGGKIGVIGTPMTVQSDIYRQKIHDLDPDLQVESLACPKFAPLVESGALSTSVTKKVVYETLRPLVG-KVDSLILGCTHYPLLRPIIQNVMGPKVQLIDSGAECVRDISVLLNYFEINRGRDAGPLHHRFYTTASSQSFAQIGEEWLEKEIHVEHVEL
3OUT Chain:C ((5-258))LDNRPIGVFDSGIGGLTIVKNLMSILPNEDIIYFGDIARIPYGTKSRATIQKFAAQTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSL-VD--NLNTVGVIATPATINSNAYALQIHKKNPNIEVYSNPCGLFVSMIEEGFVSGHIVELVAKEYLSYFHDKNIQALILGCTHYPIIKESIAKIL--DVKLIDPSLQASKMLYSLLFENKLLNTT-KSNPEYRFYVTDIPLKFRSVGEMFLQTEMQ------


General information:
TITO was launched using:
RESULT:

Template: 3OUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1503 -113748 -75.68 -451.38
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain C : 0.80

3D Compatibility (PKB) : -75.68
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_3OUT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OUT-query.scw
PDB file : Tito_Scwrl_3OUT.pdb: