Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKIKPIKLVIIVVCIAIIAVLAWKFLKPKQQQPQYITAEVTRGDIENNVLATGTLDATKLISVGAQVSGQVKKMYVQLGDQVKQGQLIAQIDSTTQENSLKTSDANIKNLEAQRLQQVASLNEKQLEYRRQQQMYAQDATPRADLESAEAAYKTAQAQVKALDAQIESAKVTRSTAQTNIGYTRIVAPTDGTVVAIVTEEGQTVNANQSAPT--IVKIAKLQNMTIKAQVSEADIMKVEK----GQ---------QVYFTTLGDE-TKRYATLRQIEPAPDSISSESNSTTSSTTSSAVYYNALFDVPNTDGKLRIDMTAQVYIVLNSAKNALLVPSSALSSKQFSGQRKQQGQSADKASSTPSAERKHQGNGARLERLNLTPEQKQLIEQGKATLSVVRVLQADGTTKPTQILVGINNRVNAQVLAGLKQGDQVVIADSSENSAASANSGNNRRRGPMGM
1VF7 Chain:J ((26-260))----------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS--------------TQEQAQRYKLLVADQAVSKQQYADANAAYLQ--------------SKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQ---ANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEG--------------TGSVTIRAVFPNPNNELLPGMFVHAQLQ----------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 845 -27322 -32.33 -124.76
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain J : 0.64

3D Compatibility (PKB) : -32.33
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.408

(partial model without unconserved sides chains):
PDB file : Tito_1VF7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VF7-query.scw
PDB file : Tito_Scwrl_1VF7.pdb: