Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMGKNVVVLGTQWGDEGKGKIVDLLTDQAAAVVRYQGGHNAGHTLVVGGKKTVLHLIPSGILREKVLCLIGNGVVLSPAALIEEMGILEAEGVPVKERLRISPNCPLILPNHIALDQAREKKRGNAKIGTTGRGIGPAYEDKVARRAVRVADLVRGGAALEEKLTEMLELHNFQLTQFYGVEAVKFEDVLALCNQWREVLAPLVIDVTKVLHDYRKEGKAVMFEGAQGSLLDIDHGTYPYVTSSNTTAGGVSSGSGMGPLHLDYVLGITKAYTTRVGAGPFPTELVYDAASDSGDPIGKHLGTVGHEFGASTGRQRRCGWFDAEILRRSVDVNSLSGICLTKLDVLDGLEEVKICVGYENTDSGC-VGSSDAVSFECLKPIYETMPGWSESTVGLTSIDQLPANALAYVKRIEQLIECPIDIVSTGPDRAETIILRHPFSA
4M9D Chain:B ((3-431))AMSSVVVVGTQWGDEGKGKITDFLSEHAEVVARYQGGNNAGHTIVFGGVKYKLHLIPSGIFYKEKICVIGNGLVVDPKALLEELKYLHDRGVS-TDNLRVSNRAHVILPYHLKQDELEEASKGDNKIGTTKKGIGPAYMDKAARIGIRMADLLDR-EAFKEKLEQNLAQKNRLFEKMYDTEGFSVDEIFEEYFEYGQQIAQYVCDTSVVLNDALDNNHRVLFEGAQGVMLDIDHGTYPFVTSSNPIAGGVTVGTGVGPAKVTRVVGVCKAYTSRVGDGPFPTELH--------DEIGHQIREVGREYGTTTGRPRRVGWFDSVVVRHARRVSGLTDLSLNSIDVLTGIPTLKICVAYKCDGKVIDEVPANLNILAKCEPVCEELPGWTEDITGVRSLDELPENARKYVERVSELTGIQLSMFSVGPDRNQTNIVRNVYE-


General information:
TITO was launched using:
RESULT:

Template: 4M9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2632 -169589 -64.43 -396.24
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -64.43
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.502

(partial model without unconserved sides chains):
PDB file : Tito_4M9D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M9D-query.scw
PDB file : Tito_Scwrl_4M9D.pdb: