Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYEAVPPLLK
4B5C Chain:C ((26-137))------------------------------------------------------------------------NSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLVYQ-------


General information:
TITO was launched using:
RESULT:

Template: 4B5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 498 -17836 -35.81 -159.25
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : -35.81
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4B5C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B5C-query.scw
PDB file : Tito_Scwrl_4B5C.pdb: