Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITKTLPLTDIHRHLDGNIRIQTILELGQQYNLDLPAYDIESLRPHVQVMDNQPDLLSFLSKLDWGVKVLASLDACKRIAFENMQDAAQQGLDYVELRFSPGYMGM-AHQLPLEGVVEAVIAGVKEGSQAYGVKANLIGIMSRTFGQEACEKELNALLAH-KNDIKALDLAGDELGFPGNLFIDHFKKARDAGWHITVHAGEAAG-PESIWQAIEELGAERIGHGVKAVQDLKLLDYLAKHQIGIESCLTSNIQTNTVPS---LAEHPLKTFLEHGVLATINTDDPAVEGIEIQHEYLTAAPLAGLSPEQIYTAQENGLKIAFLSEQEKDELRQKYQ
4GXW Chain:A ((24-353))AFFHALPKVELHCHLLGAVRHDTFVALAQRSGAPIERAE---IDAFYARGEKPVGVLHVLRALDRY--LLTRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVS-GIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQDPDEAVAIVDWMKANRADEVAGIGIDYRENDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHVDRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNTDDPTLHKVNPSEAWELMFSHFGFTIADLKQFMLNGIDGAWVDDDTKAAWRAAW-


General information:
TITO was launched using:
RESULT:

Template: 4GXW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1914 -13275 -6.94 -40.97
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -6.94
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_4GXW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GXW-query.scw
PDB file : Tito_Scwrl_4GXW.pdb: