Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLSRQLEVSLRLAVSMARQKRHEFLTVEHLLLALLDNDSAVNALKACGADIVSLRKELEEYVEQHTPKLGENSEQAPHPTESFDRILQRAIFHVQSSGGDRTVEGADVLVAMYSERDSFAVYLLKRHQINRLTLTQYLSHGTRKDEVQVEEEVEDIEGESNSGNAGPLELYTLNLNVEAQKGKTDPLIGREKEIERTAQILCRRRKNNPLLVGDPGVGKTSIAEGLAWLIVNGKAPKPLSHAEIYSLDIGALVAGTKYRGDFEKRLKQLLNALKK-NPNAILFIDEIHMIIGAGSSMGSTMDASNLIKPALANGTLRCIGSTTFQEYRQVFEKDHALSRRFQKIDVNEPSISETIDILRGLKTKFEDFHHVQYDDKALVSAVELSAKFINDRFLPDKAIDVIDEAGAQCRLKAESE-----------------------------------------------------------------------------------------------------------------------------------DSLITVENIEDIVSKIARIPPKTVSKDDKSVLENLERDLKRVVFGQDEAITALASAIKLSRAGLKSPDKPVGSFVFAGPTGVGKTEVTKQLAKLL---GVELVRFDMSEYMERHAVSRLIGAPPGYVGYDQGGLLTDAIHKNPHCVLLLDEIEKAHPDVFNLLLQIMDHGALTDNNGRKSDFRNVIIVLTTNIGAESISRASIGFTEQ--DHSSDNQEAMKRAFSPEFRNRLDGVIQFKALPTTVIESVVDKFLTELQAQLDE--KRVVLDVDQSACDWLATNGYDRLMGARPMQRLIQEHLKKPLAEMILFGELADHGGNVAVSVKKEDGKAVGLKLEVFEDHHTAEPA
5D4W Chain:A ((173-888))------------------------------------------------------------------------------------------------------------------------------------------------------------------QENENLSKFCIDMTAMAREGKIDPVIGREEEIRRVIRILSRRTKNNPVLIGEPGVGKTTIVEGLAQRIVNADVPDNLAACKLLSLDVGALVAGSKYRGEFEERMKGVLKEIQESKETIILFVDAIHLLMGA-------MDAANLLKPMLARGQLHCIGATTLAEYRKYIEKDAAFERRFQQVLVKEPSISETISILRGLKEKYEVHHGVNIADAAIVAAANLAARYLTSRRLPDSAVDLIDEAAAAVRVARESQPEIIDSLERRLRQLKIEIHALSREKDEASKARLAQAKQDAQNVEEELRPLREKYERERQRGKAIQEAKMKLEALRVKAEDASRMGDHSRAADLQYYAIPEQEAIIKRLEAEKAAADAALNANGADVGGSMITDVVGPDQINEIVARWTGIPVTRLKTSEK----HMEQALSKIVVGQKEAVQSVSNAIRLQRSGLSNPNQP-PSFLFCGPSGTGKTLLTKALAEFLFDDPKSMIRFDMSEYQERHSLSRMIGAPPGYVGHDAGGQLTEALRRRPFSILLFDAVEKAAKEVLTVLLQLMDD---TDGQGRVVDAKNCIVVMTSN----------------DPTTRELVMNTLRNYFLPEFLNRISSVVIFNRLTRREIRKIVDLRIAEIQKRLTDNDRNVIIKVSEEAKDKLGAQGYSPVYGARPLQRLLEKEVLNRLAILILRGQIR-EGEVAHVELVDGKVQ------------------


General information:
TITO was launched using:
RESULT:

Template: 5D4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2233 -67846 -30.38 -124.49
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -30.38
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.248

(partial model without unconserved sides chains):
PDB file : Tito_5D4W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D4W-query.scw
PDB file : Tito_Scwrl_5D4W.pdb: