Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLKDYIATIENYPKEGITFRDISPLMADGNAYSYAVREIVQYATDKKVDMIVGPEARGFIVGCPVAFELGIGFAPVRKPGKLPREVISADYEKEYGVDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGVMAGCAFLVELDELNGREKIGDYDYK--VLMHY
5B6H Chain:A ((7-178))KYIKDSIKTIPDYPKAGILFRDVTSLLENPKAYSASIELLSEHYSESGVTKVVGTEARGFLFGAPVALALGVGFVPVRKPGKLPRETISESYELEYGTDTLEIHTDSIQPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVVHAAFIINLPELGGEARLTQQGIHCYSLVSF


General information:
TITO was launched using:
RESULT:

Template: 5B6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 853 -130356 -152.82 -766.80
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.87

3D Compatibility (PKB) : -152.82
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.87
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_5B6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5B6H-query.scw
PDB file : Tito_Scwrl_5B6H.pdb: