Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNVSMTQRISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKQHGLFDIDIHCDGDLEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMDIPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKALARALRMACEIDPRAENTIASTKGSL
2AE8 Chain:C ((30-208))--------MIYQKQR----TQLNISISDDQSPS-HINTGVGFLNHMLTLFTFHSGLSLNIEAQG----DDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVVINARLTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTAT--------------


General information:
TITO was launched using:
RESULT:

Template: 2AE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 924 -145511 -157.48 -850.94
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.80

3D Compatibility (PKB) : -157.48
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.426

(partial model without unconserved sides chains):
PDB file : Tito_2AE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2AE8-query.scw
PDB file : Tito_Scwrl_2AE8.pdb: