Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMSRRAYAEMFGPTVGDRIRLADTALFIEVEQDLTTYGEEVKFGGGKVIRDGMGQSQLLADEVADTVITNALIVDWWG---IVKADVGLKNGRIWKIGKAGNPDIQPDITIPLGAATEVIAGEGQILTAGGIDTHIHWICP------------------------QQVETALMSGTTTMVGGGTGPAAGTSATTVTPGPWHIATMLQAIDDLPMNIGL---------------------------------------LG--K-G---NLS-LPDPIREQIKAGVIGLKLHED-------------WGSTPAAIDNCLSVADEYDVQVAIHTDTLNEGGFLEETLAAFKDRTIHTYHTEGAGGGHAPDILKAIGQSNVLPSSTNPTRPYTINTIDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILQDLGAIVMMSSDSQAMGRVGEVILRTWQTAHKMKVQ------RGPLEGD-N-EFHDNNRIKRYIAKYTINPAITHGLSHEIGSVEVGKLADLVLWKPAFFG-----VKPSMIIKGGMIAAAPMGDINASIPTPQPVHYRPMFGAYPRGVHNTCITFLSQAAIDEKVAEKLNLKKLISPCKNTRSITKADMKHNTYCPVMQVHPETYEVRADGELLTCEPADVLPMAQRYFLF
4UB9 Chain:A ((32-481))--------------------------------------------------------------EGETIAIVGGTLIDGNGGVPVPETTVFIEDGRITKVGSTDQIE--------VHPNIRQIDAQGKWILPGLVNGNVHLLDGIMMMGRGGIEYLARFEGNYYKVIEEAAQIALRGGVTTVFDTWNALEPVT----------IARDRIASGAAEGARIFFAGTLIGMGGPFTGDFMRPSMQARTVMSRTFADRMDAMFEVGMGRHLSTLPPAEVRPLIREYLERGVDFCKIAVTDHLVGLLGFRAPYFTFSERVLDVLVDEVRRAGVPLLTHTTSLEG---LNTAIERDADLMIHATMTGQA--PIPEETIEKLLEKQLWSE-VQPTTIAQ-------------QAWMDS---VDHPF-ADFSGRVHHENDVRMIKAGVPLVLGTDAGCTDP------DILEDMSQGELHERPWTLGEDHFVWMQAMVEKGMDPMAAILAGTANPAKAYRKFDELGSIDVGKLGDVVVLDQDPLADITNMRTLSHVVKEGREIDFHGLPL----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UB9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1801 3150 1.75 8.97
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 1.75
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4UB9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UB9-query.scw
PDB file : Tito_Scwrl_4UB9.pdb: