Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEMMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEINYEAVPPLLK
4B5C Chain:B ((26-137))------------------------------------------------------------------------NSPLAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLVYQ-------


General information:
TITO was launched using:
RESULT:

Template: 4B5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 510 -21536 -42.23 -192.28
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -42.23
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.585

(partial model without unconserved sides chains):
PDB file : Tito_4B5C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4B5C-query.scw
PDB file : Tito_Scwrl_4B5C.pdb: