Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETFAPNL------ENFLEKYKENEARE-LEHPILFEGVSDLLEDILNQGGRHFLVSHRN-DQVLEILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTH-LFTSIVNLRQVLDI
3KBB Chain:A ((1-192))-----MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGK----


General information:
TITO was launched using:
RESULT:

Template: 3KBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 804 16489 20.51 91.10
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 20.51
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_3KBB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KBB-query.scw
PDB file : Tito_Scwrl_3KBB.pdb: