Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTITPKPDSVVYRVRVAVPVHLYDTFDYTLTKAQYERAQVGSRVAISFGRQNLIGIITEKVDPQESFTGNFQLKAISELLDDEPILDEQVLNLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKIIPCDNAEALLKRSIKQQDAYQILKLHPAGTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPAPVQLAQMPLTLNEDQKKATQHVLNAQHQYQAFLLDGLTGSGKTEVYLHIMHEVLKQ------------GKQVLVLVPEIGLTPQTISRFKSRFNC---DIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIY-------TPLPRLGLIILDEEHDLSYKQQEGFRYHARDVALY--RGHLQGCPVLLGSATPSIDSYHLVET--GKLTALQLNQRAGHALLPKMHLIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTVHRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDHDVIRVDRDSTSRVGSWQKIYDRIQQNKPSILLGTQMLAKGHHFPHVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVALLPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGGIVDIWGPIPAPMERKAGRYRAHMVILSADRTRLHFYLRQWWAQLVHAPRQHQLRLSIDVDPQEFS
4D25 Chain:A ((71-408))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RKPTPIQKNAIPIIM---SGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLISENGCAQPQVIIVSPTRELTLQIFNEARKFSYGSVLKVAVAYGGTAVRHQGDNI----ARGCHILVATPGRLHDFVERNRVSFGSVRFVVLDQADCMLDMG---FMPSIEKMMLHPTMVETTKRQTLMFSATFPEDIQHLAGRFLNNYLFVAVGIVGGASTDVEQIFIEVTK----YEKRNSLKQLIEEN--DGKRILVFVETKRNAD-------------------------------------------------------------FIAAMLSEQ--QLLTSSIHGDRMQR--EREEALQNFKSGKHCILVATAVAARGLDIKNVDIVVNYDLPKSI------------DEYVHRIGRTGRVGNRGKAVSFYDSD----------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1666 -35753 -21.46 -114.59
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -21.46
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.432

(partial model without unconserved sides chains):
PDB file : Tito_4D25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D25-query.scw
PDB file : Tito_Scwrl_4D25.pdb: